STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pmgAAnti-sigma regulatory factor (Ser/Thr protein kinase), essential for photomixotrophic growth, PmgA; Sly1004210. (171 aa)    
Predicted Functional Partners:
hik19
Signal transduction histidine kinase; Sly1005990.
  
  
 0.915
hik14
Signal transduction histidine kinase; Sly1007240.
  
  
 0.878
AIE72570.1
Anti-sigma F factor antagonist (spoIIAA-2); Sly1004020.
  
 
 0.836
AIE73642.1
Hypothetical protein; Sly2000470; Belongs to the anti-sigma-factor antagonist family.
  
 
 0.836
AIE73644.1
Anti-sigma F factor antagonist (spoIIAA-2); Sly2000450; Belongs to the anti-sigma-factor antagonist family.
  
 
 0.836
rsbV
Putative anti-sigma factor antagonist; Sly1020890; Belongs to the anti-sigma-factor antagonist family.
  
 
 0.836
AIE74558.1
Hypothetical protein; Sly1016440.
  
 
 0.800
AIE74587.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); Sly1016140.
  
 
 0.791
AIE72551.1
Lipase family protein; Sly1004220.
       0.775
AIE73745.1
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s); Sly1025270.
  
   0.750
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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