STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE72736.1L-lactate permease; Sly1002410. (198 aa)    
Predicted Functional Partners:
AIE75513.1
Putative membrane protein, specific for cyanobacteria; Sly1006430.
  
     0.774
ndhL
NADH dehydrogenase subunit NdhL; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.772
AIE73898.1
Hypothetical protein; Sly1027300.
  
     0.770
AIE74873.1
Hypothetical protein; Sly1013270.
  
     0.770
AIE72972.1
Hypothetical protein; Sly1024930.
  
     0.769
AIE75596.1
Hypothetical protein; Sly1005600.
  
     0.767
AIE75903.1
Hypothetical protein; Sly1019960.
  
     0.766
AIE72534.1
Beta-lactamase class A; Sly1004400.
  
     0.763
AIE75858.1
Hypothetical protein; Sly1020420.
  
     0.762
AIE73167.1
Transcriptional regulator AbrB; Sly2001570.
  
     0.761
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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