STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE73329.1Hypothetical protein; Sly3001480. (282 aa)    
Predicted Functional Partners:
AIE74964.1
Hypothetical protein; Sly1012340.
  
     0.774
AIE72875.2
Fibrillin; Sly1000850.
  
     0.773
psbO
Photosystem II manganese-stabilizing protein (PsbO); Sly1004670.
  
     0.773
psb28,
Photosystem II 13 kDa protein Psb28 (PsbW); Sly1001550; Belongs to the Psb28 family.
  
     0.771
ftrC
Ferredoxin; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
  
     0.770
AIE75068.1
Conserved NnrU/NnuR membrane enzyme; Sly1011300.
  
     0.770
psb27,
Photosystem II protein Psb27; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.
  
     0.768
AIE74940.1
Hypothetical protein; Sly1012600.
  
     0.768
AIE72852.1
Hypothetical protein; Sly1001060.
  
     0.765
ycf53
GUN4-like protein; Sly1024910.
  
     0.762
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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