STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE73335.1Hypothetical protein; Sly3001540. (450 aa)    
Predicted Functional Partners:
AIE73336.1
Hypothetical protein; Sly3001550.
 
     0.909
AIE73895.1
Hypothetical protein; Sly1027330.
  
   
 0.775
AIE74944.1
Hypothetical protein; Sly1012560.
  
     0.770
AIE73225.1
Hypothetical protein; Sly2000990.
  
     0.766
AIE73992.1
Hypothetical protein; Sly1026370.
  
     0.766
AIE73249.1
Hypothetical protein; Sly3000660.
  
     0.762
AIE73434.1
Hypothetical protein; Sly1029390.
  
     0.760
AIE73470.1
Sigma-fimbriae usher protein; Sly1029000.
  
     0.759
AIE73954.1
Hypothetical protein; Sly1026750.
  
     0.757
AIE74335.1
Hypothetical protein; Sly1018640.
  
     0.756
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.