STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE73674.1Hypothetical protein; Sly2000160. (225 aa)    
Predicted Functional Partners:
AIE74528.1
Hypothetical protein; Sly1016760.
  
     0.665
AIE74719.1
Protein of unknown function DUF490; Sly1014840.
 
     0.660
AIE72842.1
Hypothetical protein; Sly1001360.
  
     0.619
ycf39-2
Hypothetical protein YCF39; Sly2000150.
       0.594
AIE75114.1
Chromosome (plasmid) partitioning protein ParA; Sly1010340.
  
     0.590
AIE75267.1
Ribonucleotide reductase of class Ia (aerobic), beta subunit; Sly1008840.
  
     0.585
AIE74480.1
Hypothetical protein; Sly1017220.
  
     0.571
AIE73164.1
Hypothetical protein; Sly2001600.
  
     0.570
AIE72724.1
Hypothetical protein; Sly1002520.
  
     0.544
AIE73146.1
Zinc-regulated outer membrane porin; Sly2001770; Belongs to the OprB family.
 
     0.530
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.