Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIE73494.1 | AIE73495.1 | D082_09660 | D082_09670 | CheY subfamily; Sly1028760. | Hypothetical protein; Sly1028750. | 0.978 |
AIE73494.1 | AIE74356.1 | D082_09660 | D082_18280 | CheY subfamily; Sly1028760. | Two-component system, regulatory protein; Sly1018430. | 0.914 |
AIE73494.1 | cheW | D082_09660 | D082_18290 | CheY subfamily; Sly1028760. | Chemotaxis protein; Sly1018420. | 0.936 |
AIE73494.1 | ctr1 | D082_09660 | D082_18300 | CheY subfamily; Sly1028760. | Methyl-accepting chemotaxis protein; Sly1018410. | 0.935 |
AIE73494.1 | hik39 | D082_09660 | D082_09690 | CheY subfamily; Sly1028760. | Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt; Sly1028730. | 0.608 |
AIE73494.1 | hik43 | D082_09660 | D082_29670 | CheY subfamily; Sly1028760. | Signal transduction histidine kinase CheA; Sly1006610. | 0.939 |
AIE73494.1 | pilJ | D082_09660 | D082_09680 | CheY subfamily; Sly1028760. | Methyl-accepting chemotaxis protein (MCP-like); Sly1028740. | 0.968 |
AIE73494.1 | pixL, | D082_09660 | D082_07360 | CheY subfamily; Sly1028760. | Signal transduction histidine kinase CheA; Sly3000820. | 0.429 |
AIE73495.1 | AIE73494.1 | D082_09670 | D082_09660 | Hypothetical protein; Sly1028750. | CheY subfamily; Sly1028760. | 0.978 |
AIE73495.1 | AIE74354.1 | D082_09670 | D082_18260 | Hypothetical protein; Sly1028750. | Two-component response regulator; Sly1018450. | 0.653 |
AIE73495.1 | AIE74356.1 | D082_09670 | D082_18280 | Hypothetical protein; Sly1028750. | Two-component system, regulatory protein; Sly1018430. | 0.901 |
AIE73495.1 | cheW | D082_09670 | D082_18290 | Hypothetical protein; Sly1028750. | Chemotaxis protein; Sly1018420. | 0.912 |
AIE73495.1 | ctr1 | D082_09670 | D082_18300 | Hypothetical protein; Sly1028750. | Methyl-accepting chemotaxis protein; Sly1018410. | 0.913 |
AIE73495.1 | hik36 | D082_09670 | D082_09930 | Hypothetical protein; Sly1028750. | Chemotaxis protein cheA; Sly1028480. | 0.720 |
AIE73495.1 | hik39 | D082_09670 | D082_09690 | Hypothetical protein; Sly1028750. | Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt; Sly1028730. | 0.977 |
AIE73495.1 | hik43 | D082_09670 | D082_29670 | Hypothetical protein; Sly1028750. | Signal transduction histidine kinase CheA; Sly1006610. | 0.989 |
AIE73495.1 | pilJ | D082_09670 | D082_09680 | Hypothetical protein; Sly1028750. | Methyl-accepting chemotaxis protein (MCP-like); Sly1028740. | 0.976 |
AIE73495.1 | pixL, | D082_09670 | D082_07360 | Hypothetical protein; Sly1028750. | Signal transduction histidine kinase CheA; Sly3000820. | 0.958 |
AIE74354.1 | AIE73495.1 | D082_18260 | D082_09670 | Two-component response regulator; Sly1018450. | Hypothetical protein; Sly1028750. | 0.653 |
AIE74354.1 | AIE74356.1 | D082_18260 | D082_18280 | Two-component response regulator; Sly1018450. | Two-component system, regulatory protein; Sly1018430. | 0.591 |
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