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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
natBBranched-chain amino acid ABC transporter, amino acid-binding protein; Sly1016980. (442 aa)    
Predicted Functional Partners:
natC
Branched-chain amino acid transport system permease protein LivM; Sly1000280; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.984
natA
Branched-chain amino acid transport ATP-binding protein LivG; Sly1005960.
 
 
 0.984
natD
High-affinity branched-chain amino acid transport system permease protein LivH; Sly1020940; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.983
natE
Branched-chain amino acid transport ATP-binding protein LivF; Sly1007770.
 
 
 0.972
AIE73397.1
Urea ABC transporter, permease protein UrtC; Sly1029770; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.754
livH
Urea ABC transporter, permease protein UrtB; Sly1029780; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.742
urtE
Urea ABC transporter, ATPase protein UrtE; Sly1005330.
 
  
 0.623
bgtB
Gln/Arg/Lys/His-binding protein and permease protein; Sly1022700.
  
 
 0.576
AIE74503.1
Hypothetical protein; Sly1016990.
       0.560
urtD
Urea ABC transporter, ATPase protein UrtD; Sly1020640.
 
   
 0.458
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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