STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE74700.1Acetyltransferase; Sly1015040. (180 aa)    
Predicted Functional Partners:
AIE74698.1
Glycosyltransferase; Sly1015060.
    0.820
wcaJ
Undecaprenyl-phosphate galactosephosphotransferase; Sly1016710.
  
  
 0.732
AIE74669.1
Chloramphenicol acetyltransferase; Sly1015350.
  
     0.732
AIE74699.1
UDP-glucose 4-epimerase; Sly1015050; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.720
AIE74701.1
Hypothetical protein; Sly1015030.
 
    0.675
epsB
Opolysaccharide export protein; Sly1015520.
  
  
 0.526
AIE74694.1
Putative galactosyl transferase PssJ; Sly1015100.
 
   
 0.484
AIE74695.1
Glycosyl transferase group 1; Sly1015090.
  
  
 0.447
AIE74697.1
Glycosyl transferase group 1; Sly1015070.
  
    0.436
AIE74696.1
Hypothetical protein; Sly1015080.
       0.428
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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