STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE74883.1TRAP transporter solute receptor, unknown substrate 1; Sly1013170. (517 aa)    
Predicted Functional Partners:
AIE75699.1
Hypothetical protein; Sly1004560.
  
     0.648
dctP
Putative C4-dicarboxylase binding protein, periplasmic protein; Sly2000270.
  
   
 0.533
AIE74881.1
Metallo-beta-lactamase superfamily protein; Sly1013190.
       0.526
AIE73828.1
Methyltransferase FkbM; Sly1026090.
  
     0.519
AIE74064.1
Hypothetical protein; Sly1022870.
  
     0.452
AIE75520.1
Hypothetical protein; Sly1006370.
  
     0.451
AIE72773.2
Hypothetical protein; Sly1002040.
  
     0.443
AIE72782.2
Hypothetical protein; Sly1001950.
  
     0.442
AIE75928.1
Hypothetical protein; Sly1019710.
  
     0.434
AIE74421.1
S-layer associated multidomain endoglucanase; Sly1017790.
  
     0.416
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.