STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycf57Putative iron binding protein from the HesB_IscA_SufA family; Sly1007040; Belongs to the HesB/IscA family. (118 aa)    
Predicted Functional Partners:
ycf64
Putative monothiol glutaredoxin ycf64-like; Sly1025610; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.692
AIE73695.1
Hypothetical protein; Sly3001780.
  
 
 0.677
cnfU,
NifU-like domain protein; Sly2000090.
  
 
 0.630
AIE75393.1
Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress; Sly1007590; Belongs to the GcvT family.
 
 
 0.607
nifS-2
Cysteine desulfurase; Sly1022880; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.603
nifS-3
Cysteine desulfurase; Sly1023630.
 
  
 0.589
ycf24
Iron-sulfur cluster assembly protein SufB; Sly1028440.
  
 
 0.460
sufB
Iron-sulfur cluster assembly protein SufD; Sly1028420.
  
 
 0.460
ycf16
Iron-sulfur cluster assembly ATPase protein SufC; Sly1028430.
  
 
 0.454
morR
MoxR-like ATPase in aerotolerance operon; Sly1007050.
       0.447
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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