STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ycf58Phycoerythrin linker protein CpeS-like; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (192 aa)    
Predicted Functional Partners:
cpcT
Hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
   
 0.951
cpcE
Phycocyanobilin lyase alpha subunit; Sly1007870.
  
   
 0.948
cpcB
Phycocyanin beta chain; Sly1017820.
  
   
 0.943
cpcA
Phycocyanin alpha chain; Sly1017830.
  
   
 0.942
cpcG1
Phycobilisome rod-core linker polypeptide, phycocyanin-associated; Sly1005100; Belongs to the phycobilisome linker protein family.
 
   
 0.927
cpcF-2
Phycocyanobilin lyase beta subunit; Sly1010870.
  
   
 0.927
apcB
Allophycocyanin beta chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers.
  
   
 0.905
apcA
Allophycocyanin alpha chain; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex. Allophycocyanin has a maximum absorption at approximately 650 nanometers.
  
   
 0.900
cpcF
Phycocyanin alpha phycocyanobilin lyase related protein NblB; Sly1017960.
 
   
 0.886
cpcC2
Phycobilisome rod linker polypeptide, phycocyanin-associated; Sly1017840; Belongs to the phycobilisome linker protein family.
 
   
 0.840
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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