STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AIE75737.1Pleiotropic regulatory protein; Sly1021930; Belongs to the DegT/DnrJ/EryC1 family. (378 aa)    
Predicted Functional Partners:
wcaJ
Undecaprenyl-phosphate galactosephosphotransferase; Sly1016710.
 
  
 0.958
AIE74985.1
Putative oxidoreductase; Sly1012130.
 
  
 0.740
AIE75246.1
Mannose-1-phosphate guanylyltransferase / Phosphomannomutase; Sly1009070.
  
  
 0.593
rfbA
Glucose-1-phosphate thymidylyltransferase; Sly2002630.
  
  
 0.537
trxA-2
Thioredoxin; Sly1021940; Belongs to the thioredoxin family.
       0.518
AIE75897.1
UDP-N-acetylglucosamine 2-epimerase; Sly1020020; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.479
rfbP
Undecaprenyl-phosphate galactosephosphotransferase; Sly1001420.
 
  
 0.478
fmt
Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
  
 0.432
rfbB
dTDP-glucose 4,6-dehydratase; Sly3001360; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.417
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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