STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrtDUrea carboxylase-related ABC transporter, ATPase protein; Sly1021920. (266 aa)    
Predicted Functional Partners:
AIE75739.1
Urea carboxylase-related ABC transporter, permease protein; Sly1021910.
 
  
 0.942
AIE75740.1
Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein; Sly1021900.
 
  
 0.896
AIE75485.1
Cell division protein FtsX; Sly1006710.
 
      0.855
cmpB
Bicarbonate transport system permease protein; Sly1029590.
  
 0.854
nrtB
Nitrate ABC transporter, permease protein; Sly1020800.
  
 0.852
AIE72854.1
Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein; Sly1001040.
 
  
 0.799
AIE75671.1
Alkanesulfonates-binding protein; Sly1004840.
 
  
 0.695
nrtA
Nitrate ABC transporter, nitrate-binding protein; Sly1020790.
  
 0.586
cmpA
Bicarbonate transporter, bicarbonate binding protein; Sly1029580.
  
 0.543
AIE73633.1
ABC transporter ATP-binding protein; Sly2000560.
 
    
0.477
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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