STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE75871.1Type IV pilus biogenesis protein PilN; Sly1020280. (282 aa)    
Predicted Functional Partners:
AIE75870.1
Type IV pilus biogenesis protein PilO; Sly1020290.
 
 
 0.994
pilM
Type IV pilus biogenesis protein PilM; Sly1020270.
  
 
 0.982
gspD
Type IV pilus biogenesis protein PilQ; Sly1020300.
 
 
 0.975
AIE73225.1
Hypothetical protein; Sly2000990.
  
    0.778
AIE74421.1
S-layer associated multidomain endoglucanase; Sly1017790.
  
     0.769
AIE75826.1
Cell division protein FtsQ; Sly1020730.
  
    0.767
gspE
Type IV fimbrial assembly, ATPase PilB; Sly1010180.
 
 
 0.764
AIE73992.1
Hypothetical protein; Sly1026370.
 
   
 0.763
AIE73223.1
Hypothetical protein; Sly2001010.
  
     0.762
AIE74719.1
Protein of unknown function DUF490; Sly1014840.
  
     0.760
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.