STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobMCobalt-precorrin-4 C11-methyltransferase; Sly1020080. (264 aa)    
Predicted Functional Partners:
cobJ
Cobalamin biosynthesis protein CbiG / Cobalt-precorrin-3b C17-methyltransferase; Sly1017270.
 
 0.999
cbiE,
Precorrin-6Y C5,15-methyltransferase (decarboxylating); Sly1023310.
  
 0.997
cobI
Cobalt-precorrin-2 C20-methyltransferase; Sly1007800; Belongs to the precorrin methyltransferase family.
 
  
 0.984
cbiJ
Cobalt-precorrin-6x reductase; Sly1016020.
 
  
 0.976
cobQ
Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
 0.963
cobH
Cobalt-precorrin-8x methylmutase; Sly1016240.
 
  
 0.950
AIE72633.1
Cobalt-precorrin-8x methylmutase; Sly1003420.
 
  
 0.946
cbiD
Cobalt-precorrin-6 synthase, anaerobic; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
 
  
 0.939
cobL
Cobalt-precorrin-6y C15-methyltransferase [decarboxylating]; Sly1017650.
 
  
 0.910
cobB
Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
  
 0.886
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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