STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE75905.1Permease of the drug/metabolite transporter (DMT) superfamily; Sly1019940. (333 aa)    
Predicted Functional Partners:
AIE75858.1
Hypothetical protein; Sly1020420.
  
     0.698
AIE75911.1
Hypothetical protein; Sly1019870.
 
     0.610
ycf65
Plastid-specific ribosomal protein Ycf65/PSRP-3; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.
  
     0.609
AIE75832.1
Hypothetical protein; Sly1020670.
  
     0.607
AIE75995.1
Hypothetical protein; Sly3000080.
  
     0.588
ftrC
Ferredoxin; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
  
     0.580
AIE75283.1
Hypothetical protein; Sly1008680.
  
     0.579
AIE73410.1
Hypothetical protein; Sly1029640.
  
     0.564
AIE74535.1
Hypothetical protein; Sly1016690.
  
     0.545
AIE74207.1
Hypothetical protein; Sly1024290.
  
     0.538
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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