Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIE73410.1 | AIE74207.1 | D082_08810 | D082_16790 | Hypothetical protein; Sly1029640. | Hypothetical protein; Sly1024290. | 0.653 |
AIE73410.1 | AIE74535.1 | D082_08810 | D082_20070 | Hypothetical protein; Sly1029640. | Hypothetical protein; Sly1016690. | 0.681 |
AIE73410.1 | AIE75283.1 | D082_08810 | D082_27550 | Hypothetical protein; Sly1029640. | Hypothetical protein; Sly1008680. | 0.726 |
AIE73410.1 | AIE75832.1 | D082_08810 | D082_33040 | Hypothetical protein; Sly1029640. | Hypothetical protein; Sly1020670. | 0.744 |
AIE73410.1 | AIE75858.1 | D082_08810 | D082_33300 | Hypothetical protein; Sly1029640. | Hypothetical protein; Sly1020420. | 0.741 |
AIE73410.1 | AIE75905.1 | D082_08810 | D082_33770 | Hypothetical protein; Sly1029640. | Permease of the drug/metabolite transporter (DMT) superfamily; Sly1019940. | 0.564 |
AIE73410.1 | AIE75911.1 | D082_08810 | D082_33830 | Hypothetical protein; Sly1029640. | Hypothetical protein; Sly1019870. | 0.707 |
AIE73410.1 | ftrC | D082_08810 | D082_19790 | Hypothetical protein; Sly1029640. | Ferredoxin; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | 0.619 |
AIE73410.1 | ycf65 | D082_08810 | D082_19720 | Hypothetical protein; Sly1029640. | Plastid-specific ribosomal protein Ycf65/PSRP-3; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family. | 0.661 |
AIE74207.1 | AIE73410.1 | D082_16790 | D082_08810 | Hypothetical protein; Sly1024290. | Hypothetical protein; Sly1029640. | 0.653 |
AIE74207.1 | AIE74535.1 | D082_16790 | D082_20070 | Hypothetical protein; Sly1024290. | Hypothetical protein; Sly1016690. | 0.773 |
AIE74207.1 | AIE75283.1 | D082_16790 | D082_27550 | Hypothetical protein; Sly1024290. | Hypothetical protein; Sly1008680. | 0.727 |
AIE74207.1 | AIE75832.1 | D082_16790 | D082_33040 | Hypothetical protein; Sly1024290. | Hypothetical protein; Sly1020670. | 0.517 |
AIE74207.1 | AIE75858.1 | D082_16790 | D082_33300 | Hypothetical protein; Sly1024290. | Hypothetical protein; Sly1020420. | 0.733 |
AIE74207.1 | AIE75905.1 | D082_16790 | D082_33770 | Hypothetical protein; Sly1024290. | Permease of the drug/metabolite transporter (DMT) superfamily; Sly1019940. | 0.538 |
AIE74207.1 | AIE75911.1 | D082_16790 | D082_33830 | Hypothetical protein; Sly1024290. | Hypothetical protein; Sly1019870. | 0.738 |
AIE74207.1 | AIE75995.1 | D082_16790 | D082_34670 | Hypothetical protein; Sly1024290. | Hypothetical protein; Sly3000080. | 0.838 |
AIE74207.1 | ftrC | D082_16790 | D082_19790 | Hypothetical protein; Sly1024290. | Ferredoxin; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | 0.441 |
AIE74207.1 | ycf65 | D082_16790 | D082_19720 | Hypothetical protein; Sly1024290. | Plastid-specific ribosomal protein Ycf65/PSRP-3; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family. | 0.766 |
AIE74535.1 | AIE73410.1 | D082_20070 | D082_08810 | Hypothetical protein; Sly1016690. | Hypothetical protein; Sly1029640. | 0.681 |
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