STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIE75947.1Oligopeptide-binding protein oppA; Sly1019520. (582 aa)    
Predicted Functional Partners:
AIE75358.1
Oligopeptide transport system permease protein OppB; Sly1007940.
 
 0.988
AIE75493.1
Oligopeptide transport system permease protein OppC; Sly1006630.
 
 0.987
AIE73093.1
Oligopeptide transport system permease protein OppB; Sly2002290.
 
 0.978
AIE74745.1
Oligopeptide transport system permease protein OppC; Sly1014580.
 
 0.976
AIE72874.1
Oligopeptide transport ATP-binding protein OppF; Sly1000860; Belongs to the ABC transporter superfamily.
 
 
 0.960
AIE72564.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA; Sly1004080.
  
  
 
0.922
nifJ
Pyruvate-flavodoxin oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin.
  
  
 0.879
bgtB
Gln/Arg/Lys/His-binding protein and permease protein; Sly1022700.
  
 
 0.561
hik31
Two component system histidine kinase; Sly1019530.
       0.550
AIE75267.1
Ribonucleotide reductase of class Ia (aerobic), beta subunit; Sly1008840.
  
     0.512
Your Current Organism:
Synechocystis sp. PCC6714
NCBI taxonomy Id: 1147
Other names: Aphanocapsa sp. (strain 5.3A), Aphanocapsa sp. 5-3A, Aphanocapsa sp. 5.3A, S. sp. PCC 6714, Synechocystis sp. (ATCC 27178), Synechocystis sp. (PCC 6714), Synechocystis sp. (strain PCC 6714), Synechocystis sp. ATCC 27178, Synechocystis sp. PCC 6714, Synechocystis sp. SAG 92.79, Synechocystis sp. UTCC 98, Synechocystis sp. UTEX 2470
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