STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilvDDihydroxyacid dehydratase; Belongs to the IlvD/Edd family. (551 aa)    
Predicted Functional Partners:
ilvC
Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.
 
 
 0.999
SKA87823.1
Acetolactate synthase, large subunit.
 
 0.998
SKA84853.1
Isopropylmalate/homocitrate/citramalate synthases.
 
 
 0.993
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
 
 0.992
SKA84843.1
Isocitrate dehydrogenase (NAD+).
 
  
 0.969
SKA87802.1
Acetolactate synthase-1/3 small subunit.
  
 0.965
SKA84865.1
Branched-chain amino acid aminotransferase.
  
 0.951
panB
Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.
     
 0.768
SKA84543.1
Glycerate 2-kinase.
    
 0.767
SKA98241.1
Pseudouridine kinase.
  
 
 0.754
Your Current Organism:
Caloramator quimbayensis
NCBI taxonomy Id: 1147123
Other names: C. quimbayensis, CMPUJ U833, Caloramator quimbayensis Rubiano-Labrador et al. 2013, Caloramator sp. USBA A, DSM 22093, strain USBA A
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