STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAST_1083Incomplete ABC transporter, ATP binding protein, probably The putative methylthio adenosine uptake transporter, MtaTUV. (814 aa)    
Predicted Functional Partners:
BAST_1599
ABC transporter, ATP binding protein, probably The putative methylthio adenosine uptake transporter, MtaTUV.
 
 
0.999
BAST_1600
ABC transporter, ATP binding protein, probably The putative methylthio adenosine uptake transporter, MtaTUV.
 
 
0.999
BAST_1082
Hypothetical protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.
     
 0.821
BAST_1059
Incomplete ABC transporter, permease protein, probably The putative thiamin precursor uptake transporter, YkoEDC.
 
  
 0.690
BAST_1238
Incomplete ABC transporter, permease protein, probably The putative thiamin precursor uptake transporter, YkoEDC.
 
  
 0.684
BAST_1601
ABC transporter, permease protein, probably The putative methylthio adenosine uptake transporter, MtaTUV.
 
 
 0.679
BAST_0032
ABC transporter, permease protein, probably The putative uptake transporter of unknown substrate specificity.
 
 
 0.627
BAST_0031
ABC transporter, ATP binding protein, probably The putative uptake transporter of unknown substrate specificity.
 
 
0.610
BAST_1199
ABC transporter, permease protein, probably Oligopeptide porter.
 
  
 0.610
BAST_1197
ABC transporter, ATP binding protein, probably Oligopeptide porter.
 
 
0.598
Your Current Organism:
Bifidobacterium asteroides
NCBI taxonomy Id: 1147128
Other names: B. asteroides PRL2011, Bifidobacterium asteroides PRL2011, Bifidobacterium asteroides str. PRL2011, Bifidobacterium asteroides strain PRL2011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.