Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ccmK | ccmK2 | gene:10497631 | gene:10497632 | Carbon dioxide concentrating mechanism protein; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | Carbon dioxide-concentrating mechanism protein CcmK homolog 2; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | 0.722 |
| ccmK | ccmL | gene:10497631 | gene:10497630 | Carbon dioxide concentrating mechanism protein; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | Carbon dioxide concentrating mechanism protein; ORF_ID:sll1030; To E.coli and S.typhimurium CchB. | 0.999 |
| ccmK | ccmM | gene:10497631 | gene:10497629 | Carbon dioxide concentrating mechanism protein; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | Carbon dioxide concentrating mechanism protein; ORF_ID:sll1031. | 0.994 |
| ccmK | ccmN | gene:10497631 | gene:10497628 | Carbon dioxide concentrating mechanism protein; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | CcmN protein; ORF_ID:sll1032; hypothetical protein. | 0.964 |
| ccmK | icfA | gene:10497631 | gene:10499039 | Carbon dioxide concentrating mechanism protein; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | Carbonic anhydrase; Reversible hydration of carbon dioxide. Essential to photosynthetic carbon dioxide fixation; Belongs to the beta-class carbonic anhydrase family. | 0.543 |
| ccmK | ndhF-4 | gene:10497631 | gene:10500313 | Carbon dioxide concentrating mechanism protein; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | NADH dehydrogenase subunit 5; ORF_ID:sll0026. | 0.610 |
| ccmK | rbcL | gene:10497631 | gene:10499687 | Carbon dioxide concentrating mechanism protein; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. | 0.828 |
| ccmK | rbcS | gene:10497631 | gene:10499689 | Carbon dioxide concentrating mechanism protein; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | Ribulose bisphosphate carboxylase small subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity); Belongs to the RuBisCO small chain family. | 0.798 |
| ccmK | sll0484 | gene:10497631 | gene:10500080 | Carbon dioxide concentrating mechanism protein; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | ABC transporter; ORF_ID:sll0484. | 0.542 |
| ccmK | slr0169 | gene:10497631 | gene:10499540 | Carbon dioxide concentrating mechanism protein; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | ORF_ID:slr0169; unknown protein. | 0.665 |
| ccmK2 | ccmK | gene:10497632 | gene:10497631 | Carbon dioxide-concentrating mechanism protein CcmK homolog 2; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | Carbon dioxide concentrating mechanism protein; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | 0.722 |
| ccmK2 | ccmL | gene:10497632 | gene:10497630 | Carbon dioxide-concentrating mechanism protein CcmK homolog 2; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | Carbon dioxide concentrating mechanism protein; ORF_ID:sll1030; To E.coli and S.typhimurium CchB. | 0.998 |
| ccmK2 | ccmM | gene:10497632 | gene:10497629 | Carbon dioxide-concentrating mechanism protein CcmK homolog 2; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | Carbon dioxide concentrating mechanism protein; ORF_ID:sll1031. | 0.971 |
| ccmK2 | ccmN | gene:10497632 | gene:10497628 | Carbon dioxide-concentrating mechanism protein CcmK homolog 2; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | CcmN protein; ORF_ID:sll1032; hypothetical protein. | 0.955 |
| ccmK2 | rbcL | gene:10497632 | gene:10499687 | Carbon dioxide-concentrating mechanism protein CcmK homolog 2; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. | 0.878 |
| ccmK2 | rbcS | gene:10497632 | gene:10499689 | Carbon dioxide-concentrating mechanism protein CcmK homolog 2; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | Ribulose bisphosphate carboxylase small subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site (By similarity); Belongs to the RuBisCO small chain family. | 0.793 |
| ccmK2 | sll0484 | gene:10497632 | gene:10500080 | Carbon dioxide-concentrating mechanism protein CcmK homolog 2; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | ABC transporter; ORF_ID:sll0484. | 0.550 |
| ccmK2 | slr0169 | gene:10497632 | gene:10499540 | Carbon dioxide-concentrating mechanism protein CcmK homolog 2; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | ORF_ID:slr0169; unknown protein. | 0.682 |
| ccmL | ccmK | gene:10497630 | gene:10497631 | Carbon dioxide concentrating mechanism protein; ORF_ID:sll1030; To E.coli and S.typhimurium CchB. | Carbon dioxide concentrating mechanism protein; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | 0.999 |
| ccmL | ccmK2 | gene:10497630 | gene:10497632 | Carbon dioxide concentrating mechanism protein; ORF_ID:sll1030; To E.coli and S.typhimurium CchB. | Carbon dioxide-concentrating mechanism protein CcmK homolog 2; May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered. | 0.998 |
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