STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
btpABtpA; Regulates a post-transcriptional process during the life cycle of the PSI protein complex such as (1) translation of the psaAB mRNA, (2) assembly of the PsaA/PsaB polypeptides and their associated cofactors into a functional complex, or (3) degradation of the protein complex. (287 aa)    
Predicted Functional Partners:
thiE
Thiamin biosynthetic bifunctional enzyme; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
     
 0.833
slr0082
Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
     
 0.683
slr1045
Probable ABC transporter permease protein slr1045; Could be part of an ABC transporter complex; Belongs to the MlaE permease family.
      
 0.680
slr1113
ABC transporter; ORF_ID:slr1113.
      
 0.679
slr1501
ORF_ID:slr1501; unknown protein.
      
 0.674
slr1762
ORF_ID:slr1762; unknown protein.
      
 0.674
sll1348
Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.
      
 0.657
nadB
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
      
 0.656
cbbZp
Phosphoglycolate phosphatase; ORF_ID:sll1349.
      
 0.547
slr0458
ORF_ID:slr0458; unknown protein.
      
 0.541
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.