STRINGSTRING
slr1045 protein (Synechocystis sp. PCC6803) - STRING interaction network
"slr1045" - Hypothetical protein in Synechocystis sp. PCC6803
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1045Hypothetical protein; Could be part of an ABC transporter complex (263 aa)    
Predicted Functional Partners:
sll1001
ABC transporter (260 aa)
 
 
  0.999
sll1041
ABC transporter (260 aa)
 
 
  0.999
ycf22
Hypothetical protein (456 aa)
 
  0.993
sll0752
Hypothetical protein (452 aa)
 
  0.985
slr1046
Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system (126 aa)
         
  0.984
sll0044
Hypothetical protein (161 aa)
           
  0.940
slr1693
PatA subfamily protein PixE/Rre24; Controls heterocyst pattern formation (380 aa)
           
  0.900
slr1041
PatA subfamily protein PilG/TaxP3/Rre6; Controls heterocyst pattern formation (388 aa)
         
  0.837
slr1344
Hypothetical protein (283 aa)
   
   
0.813
sll0043
CheA like protein Hik18 (1402 aa)
         
  0.763
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis, Synechocystis PCC6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B, Synechocystis sp. PCC6803
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