STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0992Esterase; Serine hydrolase involved in the detoxification of formaldehyde. (276 aa)    
Predicted Functional Partners:
sll0990
Formaldehyde dehydrogenase (glutathione); ORF_ID:sll0990; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 0.999
sll0644
Esterase; ORF_ID:sll0644.
  
  
 0.939
sll1284
Serine esterase; ORF_ID:sll1284.
      
 0.912
slr1019
Uncharacterized isomerase slr1019; ORF_ID:slr1019; hypothetical protein; Belongs to the PhzF family.
     
 0.715
sll0176
ORF_ID:sll0176; unknown protein.
  
  
 0.714
slr1916
Esterase; ORF_ID:slr1916.
      
 0.711
sll0482
ORF_ID:sll0482; hypothetical protein.
      
 0.697
sll1773
Putative quercetin 2,3-dioxygenase sll1773; Putative quercetin 2,3-dioxygenase; Belongs to the pirin family.
      
 0.690
ssl2667
NifU protein; ORF_ID:ssl2667.
      
 0.689
sll1087
Sodium-coupled permease; ORF_ID:sll1087; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
      
 0.685
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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