STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pknAProtein kinase; ORF_ID:slr1225; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (495 aa)    
Predicted Functional Partners:
sll1574
ORF_ID:sll1574; unknown protein.
  
   
 0.920
sll0778
ABC transporter; ORF_ID:sll0778.
  
 
 0.871
sll1033
ORF_ID:sll1033; unknown protein.
 
 
 0.864
sll1771
ORF_ID:sll1771; hypothetical protein.
 
 
 0.851
sll0602
ORF_ID:sll0602; unknown protein.
 
 
 0.836
sll1491
Beta transducin-like protein; ORF_ID:sll1491.
 
    0.781
mom72
Mitochondrial outer membrane 72K protein; ORF_ID:sll1667.
 
 
    0.762
sll0777
ORF_ID:sll0777; unknown protein.
      
 0.750
sll0775
ORF_ID:sll0775; unknown protein.
      
 0.750
sll0606
ORF_ID:sll0606; unknown protein.
     0.672
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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