STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdsAPhosphatidate cytidylyltransferase; ORF_ID:slr1369; gene:cdsA or cds. (293 aa)    
Predicted Functional Partners:
sll0506
Isoprenyl transferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
  
 0.989
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; ORF_ID:sll1522; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.982
sll0036
ORF_ID:sll0036; hypothetical protein; In the N-terminal section; belongs to the methylglyoxal synthase family.
    
 0.926
sll1848
1-acyl-sn-glycerol-3-phosphate acyltransferase; ORF_ID:sll1848; unknown protein; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
 
  
 0.923
dgkA
Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
    
 0.921
sll1329
Monophosphatase; ORF_ID:sll1329.
      
 0.807
sll0019
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
  
  
 0.800
sll1973
Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
     
 0.783
suhB-2
Extragenic suppressor; ORF_ID:sll1383; gene:suhB or ssyA; Belongs to the inositol monophosphatase superfamily.
      
 0.714
cydB
Cytochrome oxidase d subunit II; ORF_ID:slr1380; gene:cydB or cyd-2.
      
 0.687
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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