Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
mutS | sll1770 | gene:10498537 | gene:10498539 | DNA mismatch repair protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | ABC1-like; ORF_ID:sll1770; Belongs to the protein kinase superfamily. ADCK protein kinase family. | 0.540 |
mutS | sll1771 | gene:10498537 | gene:10498538 | DNA mismatch repair protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | ORF_ID:sll1771; hypothetical protein. | 0.682 |
sll1769 | sll1770 | gene:10498540 | gene:10498539 | Probable thylakoid lumen protein sll1769; ORF_ID:sll1769; unknown protein. | ABC1-like; ORF_ID:sll1770; Belongs to the protein kinase superfamily. ADCK protein kinase family. | 0.470 |
sll1769 | sll1771 | gene:10498540 | gene:10498538 | Probable thylakoid lumen protein sll1769; ORF_ID:sll1769; unknown protein. | ORF_ID:sll1771; hypothetical protein. | 0.412 |
sll1770 | mutS | gene:10498539 | gene:10498537 | ABC1-like; ORF_ID:sll1770; Belongs to the protein kinase superfamily. ADCK protein kinase family. | DNA mismatch repair protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | 0.540 |
sll1770 | sll1769 | gene:10498539 | gene:10498540 | ABC1-like; ORF_ID:sll1770; Belongs to the protein kinase superfamily. ADCK protein kinase family. | Probable thylakoid lumen protein sll1769; ORF_ID:sll1769; unknown protein. | 0.470 |
sll1770 | sll1771 | gene:10498539 | gene:10498538 | ABC1-like; ORF_ID:sll1770; Belongs to the protein kinase superfamily. ADCK protein kinase family. | ORF_ID:sll1771; hypothetical protein. | 0.679 |
sll1771 | mutS | gene:10498538 | gene:10498537 | ORF_ID:sll1771; hypothetical protein. | DNA mismatch repair protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | 0.682 |
sll1771 | sll1769 | gene:10498538 | gene:10498540 | ORF_ID:sll1771; hypothetical protein. | Probable thylakoid lumen protein sll1769; ORF_ID:sll1769; unknown protein. | 0.412 |
sll1771 | sll1770 | gene:10498538 | gene:10498539 | ORF_ID:sll1771; hypothetical protein. | ABC1-like; ORF_ID:sll1770; Belongs to the protein kinase superfamily. ADCK protein kinase family. | 0.679 |