Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ETR1 | phy | gene:10498257 | gene:10499807 | Ethylene response sensor protein; ORF_ID:slr1212. | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Has also a slight blue shift for the far-red maximum. Forms a two-component system with the Rrcp1 response regulator; In the N-terminal section; belongs to the phytochrome family. | 0.548 |
| ETR1 | sll0779 | gene:10498257 | gene:10500227 | Ethylene response sensor protein; ORF_ID:slr1212. | ORF_ID:sll0779; PleD gene product homologue. | 0.816 |
| ETR1 | sll1473 | gene:10498257 | gene:10500504 | Ethylene response sensor protein; ORF_ID:slr1212. | ORF_ID:sll1473; putative chromatic adaptation sensor receptor (rcaE) like. | 0.809 |
| ETR1 | sll1888 | gene:10498257 | gene:10499074 | Ethylene response sensor protein; ORF_ID:slr1212. | Sensory transduction histidine kinase; ORF_ID:sll1888. | 0.753 |
| ETR1 | sll1905 | gene:10498257 | gene:10498754 | Ethylene response sensor protein; ORF_ID:slr1212. | Hybrid sensory kinase; ORF_ID:sll1905. | 0.994 |
| ETR1 | slr0222 | gene:10498257 | gene:10499721 | Ethylene response sensor protein; ORF_ID:slr1212. | Hybrid sensory kinase; ORF_ID:slr0222. | 0.891 |
| ETR1 | slr0474 | gene:10498257 | gene:10499808 | Ethylene response sensor protein; ORF_ID:slr1212. | CheY subfamily; Forms a two-component system with Cph1 in which it acts as receiver substrate. | 0.797 |
| ETR1 | slr1759 | gene:10498257 | gene:10497917 | Ethylene response sensor protein; ORF_ID:slr1212. | Hybrid sensory kinase; ORF_ID:slr1759. | 0.990 |
| ETR1 | slr2098 | gene:10498257 | gene:10498862 | Ethylene response sensor protein; ORF_ID:slr1212. | Hybrid sensory kinase; ORF_ID:slr2098. | 0.942 |
| phy | ETR1 | gene:10499807 | gene:10498257 | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Has also a slight blue shift for the far-red maximum. Forms a two-component system with the Rrcp1 response regulator; In the N-terminal section; belongs to the phytochrome family. | Ethylene response sensor protein; ORF_ID:slr1212. | 0.548 |
| phy | sll1473 | gene:10499807 | gene:10500504 | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Has also a slight blue shift for the far-red maximum. Forms a two-component system with the Rrcp1 response regulator; In the N-terminal section; belongs to the phytochrome family. | ORF_ID:sll1473; putative chromatic adaptation sensor receptor (rcaE) like. | 0.972 |
| phy | sll1888 | gene:10499807 | gene:10499074 | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Has also a slight blue shift for the far-red maximum. Forms a two-component system with the Rrcp1 response regulator; In the N-terminal section; belongs to the phytochrome family. | Sensory transduction histidine kinase; ORF_ID:sll1888. | 0.483 |
| phy | sll1905 | gene:10499807 | gene:10498754 | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Has also a slight blue shift for the far-red maximum. Forms a two-component system with the Rrcp1 response regulator; In the N-terminal section; belongs to the phytochrome family. | Hybrid sensory kinase; ORF_ID:sll1905. | 0.596 |
| phy | slr0474 | gene:10499807 | gene:10499808 | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Has also a slight blue shift for the far-red maximum. Forms a two-component system with the Rrcp1 response regulator; In the N-terminal section; belongs to the phytochrome family. | CheY subfamily; Forms a two-component system with Cph1 in which it acts as receiver substrate. | 0.999 |
| phy | slr1563 | gene:10499807 | gene:10500474 | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Has also a slight blue shift for the far-red maximum. Forms a two-component system with the Rrcp1 response regulator; In the N-terminal section; belongs to the phytochrome family. | Probable ketoamine kinase slr1563; Ketoamine kinase that phosphorylates ketoamines on the third carbon of the sugar moiety to generate ketoamine 3-phosphate. | 0.503 |
| phy | slr1759 | gene:10499807 | gene:10497917 | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Has also a slight blue shift for the far-red maximum. Forms a two-component system with the Rrcp1 response regulator; In the N-terminal section; belongs to the phytochrome family. | Hybrid sensory kinase; ORF_ID:slr1759. | 0.612 |
| phy | slr2098 | gene:10499807 | gene:10498862 | Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region. Has also a slight blue shift for the far-red maximum. Forms a two-component system with the Rrcp1 response regulator; In the N-terminal section; belongs to the phytochrome family. | Hybrid sensory kinase; ORF_ID:slr2098. | 0.592 |
| sll0779 | ETR1 | gene:10500227 | gene:10498257 | ORF_ID:sll0779; PleD gene product homologue. | Ethylene response sensor protein; ORF_ID:slr1212. | 0.816 |
| sll0779 | sll1473 | gene:10500227 | gene:10500504 | ORF_ID:sll0779; PleD gene product homologue. | ORF_ID:sll1473; putative chromatic adaptation sensor receptor (rcaE) like. | 0.663 |
| sll0779 | sll1888 | gene:10500227 | gene:10499074 | ORF_ID:sll0779; PleD gene product homologue. | Sensory transduction histidine kinase; ORF_ID:sll1888. | 0.836 |
page 1 of 5