STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0608ORF_ID:sll0608; hypothetical protein. (104 aa)    
Predicted Functional Partners:
sll0609
ORF_ID:sll0609; unknown protein.
 
     0.952
sll0662
Ferredoxin (bacterial type ferredoxin family); ORF_ID:sll0662.
  
     0.768
ycf36
Ycf36 protein; ORF_ID:sll0584; hypothetical protein.
  
     0.765
ssl0353
ORF_ID:ssl0353; hypothetical protein.
  
     0.764
sll0558
ORF_ID:sll0558; hypothetical protein; Belongs to the ycf53 family.
  
     0.760
sll0659
ORF_ID:sll0659; unknown protein.
  
     0.754
sll1414
Protein Thf1; May be involved in photosynthetic membrane biogenesis.
  
     0.752
crtQ
Zeta-carotene desaturase precursor; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7' (By similarity).
  
     0.751
sll0933
ORF_ID:sll0933; unknown protein.
  
     0.744
psbO
Photosystem II manganese-stabilizing polypeptide; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII.
  
     0.743
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.