Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cyaA-2 | sll0594 | gene:10498749 | gene:10500114 | Adenylate cyclase; ORF_ID:slr1991. | Transcriptional regulatory protein; Probably regulates the expression of genes from the sulfate permease complex. | 0.476 |
cyaA-2 | sll1905 | gene:10498749 | gene:10498754 | Adenylate cyclase; ORF_ID:slr1991. | Hybrid sensory kinase; ORF_ID:sll1905. | 0.678 |
cyaA-2 | slr1759 | gene:10498749 | gene:10497917 | Adenylate cyclase; ORF_ID:slr1991. | Hybrid sensory kinase; ORF_ID:slr1759. | 0.708 |
glk | sll0594 | gene:10500115 | gene:10500114 | Glucokinase; ORF_ID:sll0593; Belongs to the bacterial glucokinase family. | Transcriptional regulatory protein; Probably regulates the expression of genes from the sulfate permease complex. | 0.456 |
sll0484 | sll0594 | gene:10500080 | gene:10500114 | ABC transporter; ORF_ID:sll0484. | Transcriptional regulatory protein; Probably regulates the expression of genes from the sulfate permease complex. | 0.487 |
sll0484 | slr0607 | gene:10500080 | gene:10500646 | ABC transporter; ORF_ID:sll0484. | ORF_ID:slr0607; unknown protein. | 0.728 |
sll0594 | cyaA-2 | gene:10500114 | gene:10498749 | Transcriptional regulatory protein; Probably regulates the expression of genes from the sulfate permease complex. | Adenylate cyclase; ORF_ID:slr1991. | 0.476 |
sll0594 | glk | gene:10500114 | gene:10500115 | Transcriptional regulatory protein; Probably regulates the expression of genes from the sulfate permease complex. | Glucokinase; ORF_ID:sll0593; Belongs to the bacterial glucokinase family. | 0.456 |
sll0594 | sll0484 | gene:10500114 | gene:10500080 | Transcriptional regulatory protein; Probably regulates the expression of genes from the sulfate permease complex. | ABC transporter; ORF_ID:sll0484. | 0.487 |
sll0594 | sll0595 | gene:10500114 | gene:10500113 | Transcriptional regulatory protein; Probably regulates the expression of genes from the sulfate permease complex. | ORF_ID:sll0595; unknown protein. | 0.574 |
sll0594 | sll0596 | gene:10500114 | gene:10500112 | Transcriptional regulatory protein; Probably regulates the expression of genes from the sulfate permease complex. | ORF_ID:sll0596; unknown protein. | 0.496 |
sll0594 | sll1734 | gene:10500114 | gene:10498297 | Transcriptional regulatory protein; Probably regulates the expression of genes from the sulfate permease complex. | ORF_ID:sll1734; unknown protein. | 0.420 |
sll0594 | sll1905 | gene:10500114 | gene:10498754 | Transcriptional regulatory protein; Probably regulates the expression of genes from the sulfate permease complex. | Hybrid sensory kinase; ORF_ID:sll1905. | 0.581 |
sll0594 | slr0607 | gene:10500114 | gene:10500646 | Transcriptional regulatory protein; Probably regulates the expression of genes from the sulfate permease complex. | ORF_ID:slr0607; unknown protein. | 0.896 |
sll0594 | slr1759 | gene:10500114 | gene:10497917 | Transcriptional regulatory protein; Probably regulates the expression of genes from the sulfate permease complex. | Hybrid sensory kinase; ORF_ID:slr1759. | 0.574 |
sll0594 | ssl2982 | gene:10500114 | gene:10499322 | Transcriptional regulatory protein; Probably regulates the expression of genes from the sulfate permease complex. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits (By similarity). | 0.428 |
sll0595 | sll0594 | gene:10500113 | gene:10500114 | ORF_ID:sll0595; unknown protein. | Transcriptional regulatory protein; Probably regulates the expression of genes from the sulfate permease complex. | 0.574 |
sll0595 | sll0596 | gene:10500113 | gene:10500112 | ORF_ID:sll0595; unknown protein. | ORF_ID:sll0596; unknown protein. | 0.931 |
sll0596 | sll0594 | gene:10500112 | gene:10500114 | ORF_ID:sll0596; unknown protein. | Transcriptional regulatory protein; Probably regulates the expression of genes from the sulfate permease complex. | 0.496 |
sll0596 | sll0595 | gene:10500112 | gene:10500113 | ORF_ID:sll0596; unknown protein. | ORF_ID:sll0595; unknown protein. | 0.931 |
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