STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crtXZeaxanthin glucosyl transferase; ORF_ID:slr1125. (419 aa)    
Predicted Functional Partners:
bhy
B-carotene hydroxylase; ORF_ID:sll1468.
    
 0.977
pys
Phytoene synthase; Involved in the biosynthesis of carotenoids. Catalyzes the condensation of two molecules of geranylgeranyl diphosphate (GGPP) to give prephytoene diphosphate (PPPP) and the subsequent rearrangement of the cyclopropylcarbinyl intermediate to yield 15-cis-phytoene.
     
 0.913
crtE
Geranylgeranyl pyrophosphate synthase; ORF_ID:slr0739; Belongs to the FPP/GGPP synthase family.
  
  
 0.904
cyp-2
Cytochrome P450; ORF_ID:slr0574.
 
 
 0.884
gpmB
Phosphoglycerate mutase; ORF_ID:slr1124; Belongs to the phosphoglycerate mutase family.
  
    0.613
sll0147
ORF_ID:sll0147; unknown protein.
  
  
 0.567
crtO
B-carotene ketolase; ORF_ID:slr0088.
   
 0.555
hisF
Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit (By similarity).
      
 0.542
sll1319
Uncharacterized transporter sll1319; ORF_ID:sll1319; unknown protein.
 
   
 0.416
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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