STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0225ORF_ID:sll0225; unknown protein. (512 aa)    
Predicted Functional Partners:
sll1510
ORF_ID:sll1510; unknown protein.
 
     0.790
pobA
Phenoxybenzoate dioxygenase; ORF_ID:sll1297.
 
    0.789
sll0264
ORF_ID:sll0264; unknown protein.
 
     0.764
sll1849
ORF_ID:sll1849; hypothetical protein.
 
    0.738
putA
Delta-1-pyrroline-5-carboxylate dehydrogenase; ORF_ID:sll1561; Belongs to the aldehyde dehydrogenase family.
  
 
 0.715
sll0224
ORF_ID:sll0224; hypothetical protein.
       0.714
gabD
Succinate-semialdehyde dehydrogenase (NADP+); Catalyzes the NADP(+) dependent oxidation of succinate semialdehyde to succinate.
  
 
 0.699
slr0091
Aldehyde dehydrogenase; ORF_ID:slr0091; Belongs to the aldehyde dehydrogenase family.
  
 
 0.699
slr1403
ORF_ID:slr1403; integrin alpha- and beta4- subunit domain homologue.
  
     0.662
sll0720
apxIC gene product hemolysin activation protein; ORF_ID:sll0720; Belongs to the RTX toxin acyltransferase family.
  
     0.603
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.