STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1783NarL subfamily; ORF_ID:slr1783. (282 aa)    
Predicted Functional Partners:
slr1147
Sensory transduction histidine kinase; ORF_ID:slr1147.
 
 
 
 0.963
sll0798
Sensory transduction histidine kinase; ORF_ID:sll0798.
 
 
 
 0.935
slr1759
Hybrid sensory kinase; ORF_ID:slr1759.
 
0.917
slr2104
Hybrid sensory kinase; ORF_ID:slr2104.
 
0.916
sll1905
Hybrid sensory kinase; ORF_ID:sll1905.
 
 
0.910
sll1475
Sensory transduction histidine kinase; ORF_ID:sll1475.
 
 
   0.896
sll1590
Sensory transduction histidine kinase; ORF_ID:sll1590.
 
 
 
 0.865
slr1213
AraC subfamily; ORF_ID:slr1213.
 
 
 0.854
slr0210
Sensory transduction histidine kinase; ORF_ID:slr0210.
 
 
   0.829
sll0790
Sensory transduction histidine kinase; ORF_ID:sll0790.
 
 
   0.827
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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