STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1796ORF_ID:slr1796; unknown protein. (201 aa)    
Predicted Functional Partners:
hoxF
Hydrogenase subunit; ORF_ID:sll1221.
  
 
 0.836
nusA
N utilization substance protein; Participates in both transcription termination and antitermination.
  
 
   0.823
slr1198
Rehydrin; ORF_ID:slr1198.
  
 0.797
sll0755
Thiol-specific antioxidant protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
  
 0.797
sll0350
ORF_ID:sll0350; unknown protein.
  
   
 0.794
slr0211
ORF_ID:slr0211; unknown protein.
 
 
   0.788
sll1621
Membrane protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.
   
 0.780
sll0169
ORF_ID:sll0169; unknown protein.
  
 
 
 0.776
slr0269
ORF_ID:slr0269; unknown protein.
  
     0.775
slr0250
ORF_ID:slr0250; unknown protein.
  
     0.774
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.