STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1664ORF_ID:sll1664; unknown protein. (312 aa)    
Predicted Functional Partners:
slr1677
ORF_ID:slr1677; unknown protein.
  
   
 0.732
sll0192
ORF_ID:sll0192; unknown protein.
  
     0.657
sll1663
ORF_ID:sll1663; unknown protein.
       0.631
ssl3451
ORF_ID:ssl3451; unknown protein.
  
     0.604
slr1063
ORF_ID:slr1063; hypothetical protein.
  
    0.585
slr1065
ORF_ID:slr1065; unknown protein.
  
     0.566
slr0820
Glucosyltransferase; ORF_ID:slr0820.
 
  
 0.561
slr0269
ORF_ID:slr0269; unknown protein.
  
     0.555
atp1
ATP synthase protein I; A possible function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex; Belongs to the bacterial AtpI family.
  
     0.551
slr1508
ORF_ID:slr1508; unknown protein.
  
    0.535
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.