STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1186ORF_ID:sll1186; unknown protein. (216 aa)    
Predicted Functional Partners:
sll1250
ORF_ID:sll1250; hypothetical protein.
  
   
 0.789
sll1232
ORF_ID:sll1232; hypothetical protein.
  
   
 0.786
sll1956
ORF_ID:sll1956; hypothetical protein.
  
     0.767
sll0913
ORF_ID:sll0913; hypothetical protein.
  
     0.766
sll0296
Unidentified open reading frame; ORF_ID:sll0296.
  
     0.766
sll0007
ORF_ID:sll0007; hypothetical protein.
  
     0.762
sll2007
ORF_ID:sll2007; unknown protein.
  
     0.718
sll1355
ORF_ID:sll1355; hypothetical protein.
  
     0.716
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.689
sll1072
ORF_ID:sll1072; unknown protein.
  
     0.656
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.