STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpcDPhycocyanin associated linker protein; Rod linker protein, associated with phycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer. (83 aa)    
Predicted Functional Partners:
cpcG
Phycobilisome rod-core linker polypeptide; ORF_ID:slr2051; Belongs to the phycobilisome linker protein family.
 
 
 0.999
cpcC
Phycocyanin associated linker protein; Rod linker protein, associated with phycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
 
 
 0.999
cpcC2
Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod 2; Rod linker protein, associated with phycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
 
 
 0.999
cpcA
Phycocyanin a subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
 
 
 0.999
cpcB
Phycocyanin b subunit; Light-harvesting photosynthetic bile pigment-protein from the phycobiliprotein complex.
 
 
 0.999
cpcG-2
Phycobilisome rod-core linker polypeptide; ORF_ID:sll1471; Belongs to the phycobilisome linker protein family.
  
 
 0.997
cpcE
Phycocyanin alpha phycocyanobilin lyase; Required for the chromophorylation of the CpcA gene product. Belongs to the CpcE/RpcE/PecE family.
 
  
 0.993
cpcF
Phycocyanin alpha phycocyanobilin lyase; Required for the chromophorylation of the cpcA gene product. Belongs to the CpcE/RpcE/PecE family.
 
  
 0.992
apcC
Phycobilisome LC linker polypeptide; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer (By similarity).
  
   
 0.983
apcF
Phycobilisome core component; A variant beta-allophycocyanin (AP) which forms a complex with ApcE, a phycobilisome terminal emitter that influences energy transfer to photosystem II.
  
   
 0.958
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.