STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr2025ORF_ID:slr2025; unknown protein. (153 aa)    
Predicted Functional Partners:
slr0645
ORF_ID:slr0645; unknown protein.
      
 0.896
slr1619
ORF_ID:slr1619; hypothetical protein.
      
 0.893
slr1160
ORF_ID:slr1160; unknown protein.
  
     0.766
slr0845
ORF_ID:slr0845; unknown protein.
  
     0.766
sll1274
ORF_ID:sll1274; unknown protein.
  
     0.758
slr1704
ORF_ID:slr1704; unknown protein.
  
     0.757
slr1579
ORF_ID:slr1579; unknown protein.
  
     0.750
ccmN
CcmN protein; ORF_ID:sll1032; hypothetical protein.
  
     0.749
slr1353
ORF_ID:slr1353; unknown protein.
  
     0.749
rbcX
Unknown function; ORF_ID:slr0011.
  
     0.741
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.