STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1737Tic20 family protein; ORF_ID:sll1737; hypothetical protein. (160 aa)    
Predicted Functional Partners:
slr0924
ORF_ID:slr0924; unknown protein.
  
   
 0.988
slr1747
ORF_ID:slr1747; hypothetical protein.
  
   
 0.984
sll1738
ORF_ID:sll1738; hypothetical protein.
 
     0.886
slr0598
ORF_ID:slr0598; unknown protein.
  
     0.774
sll1414
Protein Thf1; May be involved in photosynthetic membrane biogenesis.
  
    0.771
psbO
Photosystem II manganese-stabilizing polypeptide; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII.
  
    0.771
slr0815
ORF_ID:slr0815; unknown protein.
  
     0.766
sll0933
ORF_ID:sll0933; unknown protein.
  
     0.764
slr1470
ORF_ID:slr1470; unknown protein.
  
     0.763
sll1071
ORF_ID:sll1071; hypothetical protein.
  
     0.761
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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