Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| IAP75 | lpxA | gene:10498377 | gene:10499892 | Chloroplast import-associated channel IAP75; ORF_ID:slr1227. | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine o-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.870 |
| IAP75 | lpxC | gene:10498377 | gene:10497868 | Chloroplast import-associated channel IAP75; ORF_ID:slr1227. | UDP-3-o-acyl N-acetylglcosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. | 0.782 |
| IAP75 | lpxD | gene:10498377 | gene:10499612 | Chloroplast import-associated channel IAP75; ORF_ID:slr1227. | UDP-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. | 0.881 |
| IAP75 | pyrH | gene:10498377 | gene:10499440 | Chloroplast import-associated channel IAP75; ORF_ID:slr1227. | Uridine monophosphate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.782 |
| IAP75 | sll0496 | gene:10498377 | gene:10500347 | Chloroplast import-associated channel IAP75; ORF_ID:slr1227. | ORF_ID:sll0496; unknown protein. | 0.780 |
| IAP75 | slr0251 | gene:10498377 | gene:10497572 | Chloroplast import-associated channel IAP75; ORF_ID:slr1227. | ABC transporter; ORF_ID:slr0251. | 0.768 |
| IAP75 | slr0882 | gene:10498377 | gene:10498473 | Chloroplast import-associated channel IAP75; ORF_ID:slr1227. | ORF_ID:slr0882; unknown protein. | 0.786 |
| IAP75 | slr1272 | gene:10498377 | gene:10499149 | Chloroplast import-associated channel IAP75; ORF_ID:slr1227. | ORF_ID:slr1272; unknown protein. | 0.797 |
| IAP75 | slr1908 | gene:10498377 | gene:10497990 | Chloroplast import-associated channel IAP75; ORF_ID:slr1227. | ORF_ID:slr1908; unknown protein; Belongs to the OprB family. | 0.768 |
| IAP75 | ycf23 | gene:10498377 | gene:10497949 | Chloroplast import-associated channel IAP75; ORF_ID:slr1227. | Ycf23 protein; ORF_ID:slr2032; hypothetical protein. | 0.853 |
| lpxA | IAP75 | gene:10499892 | gene:10498377 | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine o-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Chloroplast import-associated channel IAP75; ORF_ID:slr1227. | 0.870 |
| lpxA | lpxC | gene:10499892 | gene:10497868 | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine o-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | UDP-3-o-acyl N-acetylglcosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. | 0.985 |
| lpxA | lpxD | gene:10499892 | gene:10499612 | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine o-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | UDP-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. | 0.978 |
| lpxA | pyrH | gene:10499892 | gene:10499440 | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine o-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | Uridine monophosphate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.469 |
| lpxA | sll0496 | gene:10499892 | gene:10500347 | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine o-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | ORF_ID:sll0496; unknown protein. | 0.759 |
| lpxA | slr0251 | gene:10499892 | gene:10497572 | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine o-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | ABC transporter; ORF_ID:slr0251. | 0.829 |
| lpxA | slr0882 | gene:10499892 | gene:10498473 | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine o-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | ORF_ID:slr0882; unknown protein. | 0.749 |
| lpxC | IAP75 | gene:10497868 | gene:10498377 | UDP-3-o-acyl N-acetylglcosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. | Chloroplast import-associated channel IAP75; ORF_ID:slr1227. | 0.782 |
| lpxC | lpxA | gene:10497868 | gene:10499892 | UDP-3-o-acyl N-acetylglcosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. | acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine o-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. | 0.985 |
| lpxC | lpxD | gene:10497868 | gene:10499612 | UDP-3-o-acyl N-acetylglcosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family. | UDP-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. | 0.985 |
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