STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacGLactose transport system permease protein; ORF_ID:slr1723. (270 aa)    
Predicted Functional Partners:
lacF
Lactose transport system permease protein; ORF_ID:slr1202.
 0.999
srrA
SrrA; ORF_ID:slr1897.
 
 0.994
ssb
Single-stranded DNA-binding protein; ORF_ID:slr0925.
      
 0.979
slr0530
Membrane bound sugar transport protein; ORF_ID:slr0530.
 
 0.978
malK
Cytoplasmic membrane protein for maltose uptake; ORF_ID:slr1224; Belongs to the ABC transporter superfamily.
 
 0.953
ggtA
ATP-binding subunit of an ABC-type osmolyte transporter; ORF_ID:slr0747; Belongs to the ABC transporter superfamily.
 
 0.953
sll0240
ABC transporter; ORF_ID:sll0240.
 
 0.832
slr1865
ORF_ID:slr1865; unknown protein.
  
 
 0.771
slr0529
ORF_ID:slr0529; unknown protein.
  
 
 0.771
ycf44
Cytochrome c biogenesis protein CcsB; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
      
 0.547
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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