STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr2092ORF_ID:slr2092; unknown protein. (133 aa)    
Predicted Functional Partners:
slr2084
ORF_ID:slr2084; unknown protein.
  
     0.645
sll0198
ORF_ID:sll0198; unknown protein.
  
     0.640
slr2038
ORF_ID:slr2038; unknown protein.
  
     0.633
slr1315
ORF_ID:slr1315; unknown protein.
  
     0.596
slr1613
ORF_ID:slr1613; unknown protein.
  
     0.571
sll1072
ORF_ID:sll1072; unknown protein.
  
     0.563
sll1232
ORF_ID:sll1232; hypothetical protein.
  
     0.560
sll1186
ORF_ID:sll1186; unknown protein.
  
     0.559
slr0445
ORF_ID:slr0445; unknown protein.
  
     0.553
slr1083
ORF_ID:slr1083; unknown protein.
  
     0.527
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.