Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
sll0489 | slr0347 | gene:10500074 | gene:10499649 | ABC transporter; ORF_ID:sll0489. | ORF_ID:slr0347; unknown protein. | 0.940 |
sll0489 | slr2105 | gene:10500074 | gene:10498870 | ABC transporter; ORF_ID:sll0489. | ORF_ID:slr2105; unknown protein. | 0.819 |
sll1219 | slr0347 | gene:10498972 | gene:10499649 | ORF_ID:sll1219; unknown protein. | ORF_ID:slr0347; unknown protein. | 0.471 |
sll1219 | slr2105 | gene:10498972 | gene:10498870 | ORF_ID:sll1219; unknown protein. | ORF_ID:slr2105; unknown protein. | 0.453 |
sll1973 | slr2105 | gene:10498869 | gene:10498870 | Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | ORF_ID:slr2105; unknown protein. | 0.511 |
slr0347 | sll0489 | gene:10499649 | gene:10500074 | ORF_ID:slr0347; unknown protein. | ABC transporter; ORF_ID:sll0489. | 0.940 |
slr0347 | sll1219 | gene:10499649 | gene:10498972 | ORF_ID:slr0347; unknown protein. | ORF_ID:sll1219; unknown protein. | 0.471 |
slr0347 | slr0643 | gene:10499649 | gene:10499864 | ORF_ID:slr0347; unknown protein. | ORF_ID:slr0643; unknown protein. | 0.456 |
slr0347 | slr2105 | gene:10499649 | gene:10498870 | ORF_ID:slr0347; unknown protein. | ORF_ID:slr2105; unknown protein. | 0.838 |
slr0643 | slr0347 | gene:10499864 | gene:10499649 | ORF_ID:slr0643; unknown protein. | ORF_ID:slr0347; unknown protein. | 0.456 |
slr0643 | slr2105 | gene:10499864 | gene:10498870 | ORF_ID:slr0643; unknown protein. | ORF_ID:slr2105; unknown protein. | 0.502 |
slr2105 | sll0489 | gene:10498870 | gene:10500074 | ORF_ID:slr2105; unknown protein. | ABC transporter; ORF_ID:sll0489. | 0.819 |
slr2105 | sll1219 | gene:10498870 | gene:10498972 | ORF_ID:slr2105; unknown protein. | ORF_ID:sll1219; unknown protein. | 0.453 |
slr2105 | sll1973 | gene:10498870 | gene:10498869 | ORF_ID:slr2105; unknown protein. | Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. | 0.511 |
slr2105 | slr0347 | gene:10498870 | gene:10499649 | ORF_ID:slr2105; unknown protein. | ORF_ID:slr0347; unknown protein. | 0.838 |
slr2105 | slr0643 | gene:10498870 | gene:10499864 | ORF_ID:slr2105; unknown protein. | ORF_ID:slr0643; unknown protein. | 0.502 |