STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll1250ORF_ID:sll1250; hypothetical protein. (128 aa)    
Predicted Functional Partners:
sll1446
ORF_ID:sll1446; hypothetical protein.
      
 0.914
slr1152
ORF_ID:slr1152; hypothetical protein.
      
 0.914
slr1546
ORF_ID:slr1546; unknown protein.
  
   
 0.833
sll1186
ORF_ID:sll1186; unknown protein.
  
   
 0.789
slr1081
ORF_ID:slr1081; unknown protein.
  
     0.760
slr2038
ORF_ID:slr2038; unknown protein.
  
     0.754
slr2084
ORF_ID:slr2084; unknown protein.
  
     0.748
sll1222
ORF_ID:sll1222; unknown protein.
  
     0.713
sll1834
ORF_ID:sll1834; unknown protein.
  
     0.681
slr1305
Regulatory components of sensory transduction system; ORF_ID:slr1305.
      
 0.680
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.