STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr1975Renin-binding protein; ORF_ID:slr1975. (391 aa)    
Predicted Functional Partners:
gdh
Glucose dehydrogenase; ORF_ID:sll1709.
      
 0.892
phbC
Poly(3-hydroxyalkanoate) synthase; When expressed in E.coli with Synechocystis PhaE and C.necator PhaA and PhaB, confers the ability to synthesize up to 13% (w/w) poly(3-hydroxybutyrate) (PHB) depending on the carbon source; all 4 genes are necessary for PHB production. Cell-free in vitro coexpression with PhaE gives a heterodimer able to polymerize 3- hydroxybutyrate-CoA ; Belongs to the PHA/PHB synthase family. Type III PhaC subfamily.
      
 0.754
recA
RecA gene product; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.
      
 0.690
ssl1046
ORF_ID:ssl1046; unknown protein.
  
     0.574
slr1880
ORF_ID:slr1880; unknown protein.
  
     0.526
ssl2501
Phasin PhaP; A phasin, it attaches to the polyhydroxybutyrate (PHB) granule surface regulating the number and size of PHB granules within a cell. It probably also acts as a regulator affecting the biosynthetic activity of PHB synthase in vivo.
      
 0.480
sll1882
ORF_ID:sll1882; hypothetical protein.
       0.459
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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