STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycf22-2Ycf22 protein; ORF_ID:sll0751; hypothetical protein. (169 aa)    
Predicted Functional Partners:
sll0752
ORF_ID:sll0752; unknown protein.
     0.986
sll1041
ABC transporter; ORF_ID:sll1041.
 
 
 0.869
slr1045
Probable ABC transporter permease protein slr1045; Could be part of an ABC transporter complex; Belongs to the MlaE permease family.
 
 
 0.860
slr1344
ORF_ID:slr1344; hypothetical protein; Belongs to the MlaE permease family.
 
 
 0.860
sll1001
ABC transporter; ORF_ID:sll1001.
 
 
 0.851
ycf36
Ycf36 protein; ORF_ID:sll0584; hypothetical protein.
  
     0.699
sll0169
ORF_ID:sll0169; unknown protein.
  
     0.676
IAP75
Chloroplast import-associated channel IAP75; ORF_ID:slr1227.
 
    0.670
ssr1391
ORF_ID:ssr1391; hypothetical protein.
  
     0.640
slr1918
ORF_ID:slr1918; unknown protein.
  
   
 0.618
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.