STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0191Uncharacterized PKHD-type hydroxylase sll0191; ORF_ID:sll0191; unknown protein. (303 aa)    
Predicted Functional Partners:
tufA
Protein synthesis elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-Tu/EF-1A subfamily.
   
   0.701
sll0471
ORF_ID:sll0471; unknown protein.
  
     0.576
sll0249
ORF_ID:sll0249; hypothetical protein; To Anabaena PCC 7120 alr2406.
  
     0.533
slr0521
ORF_ID:slr0521; unknown protein.
  
     0.526
sll1319
Uncharacterized transporter sll1319; ORF_ID:sll1319; unknown protein.
  
    0.495
groEL-2
60kD chaperonin 2; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. Belongs to the chaperonin (HSP60) family.
  
    0.453
slr0270
ORF_ID:slr0270; unknown protein.
  
     0.448
sll0720
apxIC gene product hemolysin activation protein; ORF_ID:sll0720; Belongs to the RTX toxin acyltransferase family.
  
     0.447
hemF
Coproporphyrinogen III oxidase; Involved in the heme and chlorophyll biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX.
   
  
 0.432
slr0316
ORF_ID:slr0316; unknown protein.
  
     0.417
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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