STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssl0788ORF_ID:ssl0788; unknown protein. (97 aa)    
Predicted Functional Partners:
ssl0787
ORF_ID:ssl0787; unknown protein.
    
 0.992
sll0752
ORF_ID:sll0752; unknown protein.
  
   
 0.951
gspF
General secretion pathway protein F; ORF_ID:slr0162.
      
 0.906
slr0366
ORF_ID:slr0366; unknown protein.
      
 0.906
sll0763
ORF_ID:sll0763; unknown protein.
      
 0.906
sll0413
ORF_ID:sll0413; unknown protein.
 
     0.901
sll0422
Asparaginase; Degrades proteins damaged by L-isoaspartyl residue formation (also known as beta-Asp residues). Probably performs the final step in the degradation of the reserve polymer cyanophycin (depolymerizes the building block L-beta-Asp-Arg). Also has L-asparaginase activity.
      
 0.898
slr0364
ORF_ID:slr0364; unknown protein.
      
 0.829
sll0412
UPF0754 thylakoid membrane protein sll0412; ORF_ID:sll0412; unknown protein.
 
     0.809
slr1799
ORF_ID:slr1799; unknown protein.
  
   0.784
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.