STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slr0645ORF_ID:slr0645; unknown protein. (206 aa)    
Predicted Functional Partners:
slr2025
ORF_ID:slr2025; unknown protein.
      
 0.896
slr1619
ORF_ID:slr1619; hypothetical protein.
      
 0.893
sll1940
ORF_ID:sll1940; unknown protein.
  
    0.769
sll1447
ORF_ID:sll1447; unknown protein.
  
     0.765
slr0459
ORF_ID:slr0459; unknown protein.
  
     0.760
ssl0242
ORF_ID:ssl0242; unknown protein.
  
     0.757
slr0455
ORF_ID:slr0455; unknown protein.
  
     0.751
dacB-2
Penicillin-binding protein 4; ORF_ID:slr0646; gene:dacB or pbp.
       0.737
ssl3549
ORF_ID:ssl3549; unknown protein.
  
     0.697
sll0149
ORF_ID:sll0149; unknown protein.
  
     0.687
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.