Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ftrC | psbO | gene:10499983 | gene:10499353 | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | Photosystem II manganese-stabilizing polypeptide; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII. | 0.761 |
| ftrC | sll0933 | gene:10499983 | gene:10497740 | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | ORF_ID:sll0933; unknown protein. | 0.700 |
| ftrC | sll1071 | gene:10499983 | gene:10498172 | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | ORF_ID:sll1071; hypothetical protein. | 0.576 |
| ftrC | sll1568 | gene:10499983 | gene:10498109 | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | Fibrillin; ORF_ID:sll1568. | 0.762 |
| ftrC | slr0565 | gene:10499983 | gene:10499986 | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | ORF_ID:slr0565; unknown protein. | 0.758 |
| ftrC | slr0598 | gene:10499983 | gene:10500636 | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | ORF_ID:slr0598; unknown protein. | 0.643 |
| ftrC | slr1470 | gene:10499983 | gene:10499117 | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | ORF_ID:slr1470; unknown protein. | 0.740 |
| ftrC | slr1599 | gene:10499983 | gene:10497864 | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | ORF_ID:slr1599; unknown protein. | 0.640 |
| psbO | ftrC | gene:10499353 | gene:10499983 | Photosystem II manganese-stabilizing polypeptide; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII. | Ferredoxin-thioredoxin reductase, catalytic chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin. | 0.761 |
| psbO | rub | gene:10499353 | gene:10497951 | Photosystem II manganese-stabilizing polypeptide; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII. | Rubredoxin; Rubredoxin is a small nonheme, iron protein lacking acid- labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule. Could be involved in hydrogenase-linked redox processes (By similarity). | 0.428 |
| psbO | sll0933 | gene:10499353 | gene:10497740 | Photosystem II manganese-stabilizing polypeptide; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII. | ORF_ID:sll0933; unknown protein. | 0.847 |
| psbO | sll1071 | gene:10499353 | gene:10498172 | Photosystem II manganese-stabilizing polypeptide; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII. | ORF_ID:sll1071; hypothetical protein. | 0.774 |
| psbO | sll1568 | gene:10499353 | gene:10498109 | Photosystem II manganese-stabilizing polypeptide; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII. | Fibrillin; ORF_ID:sll1568. | 0.773 |
| psbO | slr0565 | gene:10499353 | gene:10499986 | Photosystem II manganese-stabilizing polypeptide; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII. | ORF_ID:slr0565; unknown protein. | 0.808 |
| psbO | slr0598 | gene:10499353 | gene:10500636 | Photosystem II manganese-stabilizing polypeptide; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII. | ORF_ID:slr0598; unknown protein. | 0.769 |
| psbO | slr1470 | gene:10499353 | gene:10499117 | Photosystem II manganese-stabilizing polypeptide; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII. | ORF_ID:slr1470; unknown protein. | 0.773 |
| psbO | slr1599 | gene:10499353 | gene:10497864 | Photosystem II manganese-stabilizing polypeptide; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII. | ORF_ID:slr1599; unknown protein. | 0.775 |
| rub | psbO | gene:10497951 | gene:10499353 | Rubredoxin; Rubredoxin is a small nonheme, iron protein lacking acid- labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule. Could be involved in hydrogenase-linked redox processes (By similarity). | Photosystem II manganese-stabilizing polypeptide; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII. | 0.428 |
| rub | sll0933 | gene:10497951 | gene:10497740 | Rubredoxin; Rubredoxin is a small nonheme, iron protein lacking acid- labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule. Could be involved in hydrogenase-linked redox processes (By similarity). | ORF_ID:sll0933; unknown protein. | 0.655 |
| rub | slr0565 | gene:10497951 | gene:10499986 | Rubredoxin; Rubredoxin is a small nonheme, iron protein lacking acid- labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule. Could be involved in hydrogenase-linked redox processes (By similarity). | ORF_ID:slr0565; unknown protein. | 0.825 |
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