STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sll0822ORF_ID:sll0822; unknown protein. (129 aa)    
Predicted Functional Partners:
sll1734
ORF_ID:sll1734; unknown protein.
  
   
 0.789
ssr2551
ORF_ID:ssr2551; unknown protein.
  
     0.775
ssl1690
NAD(P)H-quinone oxidoreductase subunit O; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration (By similarity).
  
     0.775
sll1702
ORF_ID:sll1702; hypothetical protein; Belongs to the ycf51 family.
  
     0.774
cytM
Cytochrome; ORF_ID:sll1245.
  
     0.774
slr1302
ORF_ID:slr1302; unknown protein.
  
     0.773
sll1926
ORF_ID:sll1926; unknown protein.
  
     0.773
slr2144
ORF_ID:slr2144; unknown protein.
  
     0.773
slr1949
ORF_ID:slr1949; unknown protein.
  
     0.773
ssr0332
ORF_ID:ssr0332; unknown protein.
  
     0.773
Your Current Organism:
Synechocystis sp. PCC6803
NCBI taxonomy Id: 1148
Other names: Aphanocapsa sp. (strain N-1), Aphanocapsa sp. N-1, S. sp. PCC 6803, Synechocystis sp. (ATCC 27184), Synechocystis sp. (PCC 6803), Synechocystis sp. (strain PCC 6803), Synechocystis sp. ATCC 27184, Synechocystis sp. PCC 6803, Synechocystis sp. PCC 6803 A, Synechocystis sp. PCC 6803 B
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